Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ITGA4P13612 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.95■□□□□ 0.46
ITGA4P13612 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.95■□□□□ 0.46
ITGA4P13612 BASP1P1-201ENST00000430708 665 ntBASIC17.95■□□□□ 0.46
ITGA4P13612 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.95■□□□□ 0.46
ITGA4P13612 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.95■□□□□ 0.46
ITGA4P13612 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.95■□□□□ 0.46
ITGA4P13612 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.95■□□□□ 0.46
ITGA4P13612 IGHV3-42-201ENST00000520410 361 ntBASIC17.95■□□□□ 0.46
ITGA4P13612 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.95■□□□□ 0.46
ITGA4P13612 RARRES2P9-201ENST00000565168 469 ntBASIC17.95■□□□□ 0.46
ITGA4P13612 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.95■□□□□ 0.46
ITGA4P13612 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.95■□□□□ 0.46
ITGA4P13612 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.95■□□□□ 0.46
ITGA4P13612 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.95■□□□□ 0.46
ITGA4P13612 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.95■□□□□ 0.46
ITGA4P13612 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.95■□□□□ 0.46
ITGA4P13612 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.95■□□□□ 0.46
ITGA4P13612 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
ITGA4P13612 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ITGA4P13612 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ITGA4P13612 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 AC132872.4-202ENST00000622924 2756 ntBASIC17.94■□□□□ 0.46
ITGA4P13612 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.94■□□□□ 0.46
ITGA4P13612 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
ITGA4P13612 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ITGA4P13612 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 INGX-202ENST00000489074 768 ntBASIC17.94■□□□□ 0.46
ITGA4P13612 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.94■□□□□ 0.46
ITGA4P13612 AC069120.2-201ENST00000524091 540 ntBASIC17.94■□□□□ 0.46
ITGA4P13612 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.94■□□□□ 0.46
ITGA4P13612 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.94■□□□□ 0.46
ITGA4P13612 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.94■□□□□ 0.46
ITGA4P13612 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.94■□□□□ 0.46
ITGA4P13612 AC018529.1-201ENST00000613063 361 ntBASIC17.94■□□□□ 0.46
ITGA4P13612 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.94■□□□□ 0.46
ITGA4P13612 AL139011.1-202ENST00000642063 584 ntBASIC17.94■□□□□ 0.46
ITGA4P13612 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.94■□□□□ 0.46
ITGA4P13612 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.94■□□□□ 0.46
ITGA4P13612 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.94■□□□□ 0.46
ITGA4P13612 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.94■□□□□ 0.46
ITGA4P13612 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ITGA4P13612 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ITGA4P13612 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.94■□□□□ 0.46
ITGA4P13612 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.94■□□□□ 0.46
ITGA4P13612 AC073439.1-201ENST00000624121 1774 ntBASIC17.94■□□□□ 0.46
ITGA4P13612 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
ITGA4P13612 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ITGA4P13612 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
ITGA4P13612 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ITGA4P13612 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.93■□□□□ 0.46
ITGA4P13612 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.93■□□□□ 0.46
ITGA4P13612 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.93■□□□□ 0.46
ITGA4P13612 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.93■□□□□ 0.46
ITGA4P13612 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ITGA4P13612 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.93■□□□□ 0.46
ITGA4P13612 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.93■□□□□ 0.46
ITGA4P13612 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.93■□□□□ 0.46
ITGA4P13612 AC003101.2-201ENST00000612557 442 ntBASIC17.93■□□□□ 0.46
ITGA4P13612 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.93■□□□□ 0.46
ITGA4P13612 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
ITGA4P13612 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ITGA4P13612 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ITGA4P13612 AL645728.1-201ENST00000366221 2101 ntBASIC17.93■□□□□ 0.46
ITGA4P13612 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
ITGA4P13612 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms