Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 UXT-AS1-201ENST00000590504 1525 ntBASIC16.56■□□□□ 0.24
HLA-DQB2P05538 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 KRT18P13-201ENST00000400056 1290 ntBASIC16.56■□□□□ 0.24
HLA-DQB2P05538 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 SLC25A39P2-201ENST00000537614 270 ntBASIC16.56■□□□□ 0.24
HLA-DQB2P05538 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 KRT8P23-201ENST00000560090 1207 ntBASIC16.56■□□□□ 0.24
HLA-DQB2P05538 AL603832.2-201ENST00000566195 2125 ntBASIC16.56■□□□□ 0.24
HLA-DQB2P05538 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 AC023511.2-201ENST00000618803 211 ntBASIC16.56■□□□□ 0.24
HLA-DQB2P05538 AC055717.3-201ENST00000622967 595 ntBASIC16.56■□□□□ 0.24
HLA-DQB2P05538 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DQB2P05538 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 AC093520.2-201ENST00000561830 333 ntBASIC16.55■□□□□ 0.24
HLA-DQB2P05538 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 AL365330.1-201ENST00000607459 531 ntBASIC16.55■□□□□ 0.24
HLA-DQB2P05538 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DQB2P05538 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms