Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.65□□□□□ -0.06
APOA1P02647 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 SSR4P1-203ENST00000599569 2260 ntBASIC14.65□□□□□ -0.06
APOA1P02647 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
APOA1P02647 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
APOA1P02647 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
APOA1P02647 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.65□□□□□ -0.06
APOA1P02647 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
APOA1P02647 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.65□□□□□ -0.06
APOA1P02647 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.65□□□□□ -0.06
APOA1P02647 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOA1P02647 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
APOA1P02647 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.64□□□□□ -0.07
APOA1P02647 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
APOA1P02647 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOA1P02647 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
APOA1P02647 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
APOA1P02647 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.64□□□□□ -0.07
APOA1P02647 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
APOA1P02647 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.64□□□□□ -0.07
APOA1P02647 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.64□□□□□ -0.07
APOA1P02647 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.64□□□□□ -0.07
APOA1P02647 AC079602.3-201ENST00000623931 403 ntBASIC14.64□□□□□ -0.07
APOA1P02647 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.64□□□□□ -0.07
APOA1P02647 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.64□□□□□ -0.07
APOA1P02647 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
APOA1P02647 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.64□□□□□ -0.07
APOA1P02647 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
APOA1P02647 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
APOA1P02647 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
APOA1P02647 AL109954.1-202ENST00000564051 2148 ntBASIC14.63□□□□□ -0.07
APOA1P02647 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
APOA1P02647 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
APOA1P02647 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOA1P02647 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
APOA1P02647 ID1-201ENST00000376105 1233 ntBASIC14.63□□□□□ -0.07
APOA1P02647 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
APOA1P02647 MIR1238-201ENST00000408483 83 ntBASIC14.63□□□□□ -0.07
APOA1P02647 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.63□□□□□ -0.07
APOA1P02647 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.63□□□□□ -0.07
APOA1P02647 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.63□□□□□ -0.07
APOA1P02647 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA1P02647 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA1P02647 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA1P02647 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.63□□□□□ -0.07
APOA1P02647 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.63□□□□□ -0.07
APOA1P02647 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
APOA1P02647 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms