Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
UPK1BO75841 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 MBLAC2-202ENST00000514906 1936 ntBASIC14.27□□□□□ -0.13
UPK1BO75841 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.27□□□□□ -0.13
UPK1BO75841 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UPK1BO75841 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
UPK1BO75841 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UPK1BO75841 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
UPK1BO75841 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
UPK1BO75841 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 CICP17-201ENST00000418553 2377 ntBASIC14.26□□□□□ -0.13
UPK1BO75841 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.26□□□□□ -0.13
UPK1BO75841 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
UPK1BO75841 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1BO75841 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1BO75841 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
UPK1BO75841 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK1BO75841 AC097376.2-205ENST00000610159 5334 ntBASIC14.26□□□□□ -0.13
UPK1BO75841 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UPK1BO75841 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1BO75841 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 AP002414.1-201ENST00000391405 1147 ntBASIC14.26□□□□□ -0.13
UPK1BO75841 AC103564.2-201ENST00000432853 1299 ntBASIC14.26□□□□□ -0.13
UPK1BO75841 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1BO75841 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.26□□□□□ -0.13
UPK1BO75841 AC006970.2-201ENST00000450065 779 ntBASIC14.26□□□□□ -0.13
UPK1BO75841 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 AC122714.2-201ENST00000502787 707 ntBASIC14.26□□□□□ -0.13
UPK1BO75841 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK1BO75841 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.26□□□□□ -0.13
UPK1BO75841 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1BO75841 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
UPK1BO75841 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK1BO75841 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK1BO75841 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1BO75841 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UPK1BO75841 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK1BO75841 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.26□□□□□ -0.13
UPK1BO75841 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.26□□□□□ -0.13
UPK1BO75841 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UPK1BO75841 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK1BO75841 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
UPK1BO75841 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK1BO75841 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK1BO75841 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK1BO75841 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
UPK1BO75841 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
UPK1BO75841 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK1BO75841 GPAA1P2-202ENST00000606848 1787 ntBASIC14.25□□□□□ -0.13
UPK1BO75841 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK1BO75841 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK1BO75841 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
UPK1BO75841 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UPK1BO75841 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UPK1BO75841 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.25□□□□□ -0.13
UPK1BO75841 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.25□□□□□ -0.13
UPK1BO75841 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.25□□□□□ -0.13
UPK1BO75841 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
UPK1BO75841 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms