Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3O43889 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3O43889 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CREB3O43889 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CREB3O43889 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3O43889 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CREB3O43889 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3O43889 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.12■□□□□ 0.33
CREB3O43889 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CREB3O43889 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3O43889 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CREB3O43889 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 AC002056.1-201ENST00000395613 760 ntBASIC17.12■□□□□ 0.33
CREB3O43889 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.12■□□□□ 0.33
CREB3O43889 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.12■□□□□ 0.33
CREB3O43889 FAM58CP-201ENST00000435741 640 ntBASIC17.12■□□□□ 0.33
CREB3O43889 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CREB3O43889 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.12■□□□□ 0.33
CREB3O43889 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3O43889 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.12■□□□□ 0.33
CREB3O43889 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3O43889 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CREB3O43889 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3O43889 AC016027.1-202ENST00000607927 1699 ntBASIC17.12■□□□□ 0.33
CREB3O43889 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.12■□□□□ 0.33
CREB3O43889 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CREB3O43889 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CREB3O43889 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CREB3O43889 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.11■□□□□ 0.33
CREB3O43889 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CREB3O43889 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 LINC01144-201ENST00000626198 1710 ntBASIC17.11■□□□□ 0.33
CREB3O43889 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CREB3O43889 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.11■□□□□ 0.33
CREB3O43889 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CREB3O43889 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 AC004832.2-201ENST00000426397 482 ntBASIC17.11■□□□□ 0.33
CREB3O43889 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CREB3O43889 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.11■□□□□ 0.33
CREB3O43889 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CREB3O43889 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.11■□□□□ 0.33
CREB3O43889 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.11■□□□□ 0.33
CREB3O43889 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CREB3O43889 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.11■□□□□ 0.33
CREB3O43889 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.11■□□□□ 0.33
CREB3O43889 AL078644.1-201ENST00000609881 752 ntBASIC17.11■□□□□ 0.33
CREB3O43889 AL161645.1-201ENST00000622716 1255 ntBASIC17.11■□□□□ 0.33
CREB3O43889 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CREB3O43889 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CREB3O43889 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CREB3O43889 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.11■□□□□ 0.33
CREB3O43889 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3O43889 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3O43889 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3O43889 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CREB3O43889 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3O43889 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3O43889 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CREB3O43889 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3O43889 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3O43889 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CREB3O43889 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.1■□□□□ 0.33
CREB3O43889 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3O43889 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3O43889 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3O43889 MCCD1P2-201ENST00000423228 335 ntBASIC17.1■□□□□ 0.33
CREB3O43889 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.1■□□□□ 0.33
CREB3O43889 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CREB3O43889 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.1■□□□□ 0.33
CREB3O43889 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.1■□□□□ 0.33
CREB3O43889 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CREB3O43889 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms