Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.06■□□□□ 0.16
CDC7O00311 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.06■□□□□ 0.16
CDC7O00311 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.06■□□□□ 0.16
CDC7O00311 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.06■□□□□ 0.16
CDC7O00311 AC112504.1-201ENST00000623415 1841 ntBASIC16.06■□□□□ 0.16
CDC7O00311 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.06■□□□□ 0.16
CDC7O00311 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.06■□□□□ 0.16
CDC7O00311 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.06■□□□□ 0.16
CDC7O00311 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.06■□□□□ 0.16
CDC7O00311 AC026396.1-201ENST00000419388 421 ntBASIC16.06■□□□□ 0.16
CDC7O00311 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 AC074386.1-202ENST00000463561 864 ntBASIC16.06■□□□□ 0.16
CDC7O00311 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 AC106730.1-201ENST00000566722 1090 ntBASIC16.06■□□□□ 0.16
CDC7O00311 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.06■□□□□ 0.16
CDC7O00311 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.06■□□□□ 0.16
CDC7O00311 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
CDC7O00311 AC140113.2-201ENST00000604370 208 ntBASIC16.06■□□□□ 0.16
CDC7O00311 AC068137.2-201ENST00000605408 478 ntBASIC16.06■□□□□ 0.16
CDC7O00311 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.06■□□□□ 0.16
CDC7O00311 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.06■□□□□ 0.16
CDC7O00311 AL139384.1-201ENST00000612143 3047 ntBASIC16.06■□□□□ 0.16
CDC7O00311 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDC7O00311 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.06■□□□□ 0.16
CDC7O00311 AC011270.2-201ENST00000624293 2550 ntBASIC16.06■□□□□ 0.16
CDC7O00311 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.06■□□□□ 0.16
CDC7O00311 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDC7O00311 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC7O00311 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC7O00311 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDC7O00311 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDC7O00311 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDC7O00311 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC7O00311 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC7O00311 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.05■□□□□ 0.16
CDC7O00311 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.05■□□□□ 0.16
CDC7O00311 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC7O00311 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDC7O00311 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDC7O00311 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.05■□□□□ 0.16
CDC7O00311 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC7O00311 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.05■□□□□ 0.16
CDC7O00311 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.05■□□□□ 0.16
CDC7O00311 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.05■□□□□ 0.16
CDC7O00311 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.05■□□□□ 0.16
CDC7O00311 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDC7O00311 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.05■□□□□ 0.16
CDC7O00311 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CDC7O00311 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.05■□□□□ 0.16
CDC7O00311 PDPK2P-202ENST00000562415 1191 ntBASIC16.05■□□□□ 0.16
CDC7O00311 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDC7O00311 AP002472.1-201ENST00000577490 586 ntBASIC16.05■□□□□ 0.16
CDC7O00311 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.05■□□□□ 0.16
CDC7O00311 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.05■□□□□ 0.16
CDC7O00311 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.05■□□□□ 0.16
CDC7O00311 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC7O00311 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC7O00311 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDC7O00311 AC105917.1-201ENST00000506637 2539 ntBASIC16.05■□□□□ 0.16
CDC7O00311 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC7O00311 AC073439.1-201ENST00000624121 1774 ntBASIC16.05■□□□□ 0.16
CDC7O00311 AC069224.1-201ENST00000566372 1715 ntBASIC16.05■□□□□ 0.16
CDC7O00311 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC7O00311 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC7O00311 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDC7O00311 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDC7O00311 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDC7O00311 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CDC7O00311 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.04■□□□□ 0.16
CDC7O00311 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDC7O00311 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDC7O00311 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.04■□□□□ 0.16
CDC7O00311 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 MIR648-201ENST00000385046 94 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms