Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA3F8WFD2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 UBALD1-205ENST00000590891 2641 ntBASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 AC105233.2-201ENST00000523697 349 ntBASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 AF228730.5-201ENST00000530288 346 ntBASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 MIR4453-201ENST00000584019 89 ntBASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 AL390754.1-201ENST00000619088 582 ntBASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 AJ011932.1-201ENST00000621707 465 ntBASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA3F8WFD2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 AL512638.1-201ENST00000457493 794 ntBASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 AC069120.2-201ENST00000524091 540 ntBASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.9□□□□□ -0.02
NPIPA3F8WFD2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms