Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 LINC01023-201ENST00000606054 436 ntBASIC11.54□□□□□ -0.56
LINC01546A6NGU7 AP001350.2-201ENST00000625104 1094 ntBASIC11.54□□□□□ -0.56
LINC01546A6NGU7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 AL353732.1-201ENST00000569618 1459 ntBASIC11.54□□□□□ -0.56
LINC01546A6NGU7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 AC140479.7-201ENST00000636301 2332 ntBASIC11.54□□□□□ -0.56
LINC01546A6NGU7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01546A6NGU7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 NCF1C-201ENST00000438382 1427 ntBASIC11.53□□□□□ -0.56
LINC01546A6NGU7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 ZBED1P1-201ENST00000502364 1930 ntBASIC11.53□□□□□ -0.56
LINC01546A6NGU7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 GCSHP5-201ENST00000443090 522 ntBASIC11.53□□□□□ -0.56
LINC01546A6NGU7 AC090192.1-201ENST00000517740 490 ntBASIC11.53□□□□□ -0.56
LINC01546A6NGU7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 AC087641.1-201ENST00000557561 1021 ntBASIC11.53□□□□□ -0.56
LINC01546A6NGU7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 AC005252.3-201ENST00000623855 2258 ntBASIC11.53□□□□□ -0.56
LINC01546A6NGU7 KRT18P22-201ENST00000402024 1347 ntBASIC11.53□□□□□ -0.56
LINC01546A6NGU7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
LINC01546A6NGU7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.52□□□□□ -0.56
LINC01546A6NGU7 AC006504.5-208ENST00000588784 2401 ntBASIC11.52□□□□□ -0.56
LINC01546A6NGU7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01546A6NGU7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
LINC01546A6NGU7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01546A6NGU7 WASH6P-202ENST00000359512 1437 ntBASIC11.52□□□□□ -0.56
LINC01546A6NGU7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01546A6NGU7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.52□□□□□ -0.56
LINC01546A6NGU7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.56
LINC01546A6NGU7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01546A6NGU7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01546A6NGU7 TP73-AS1-210ENST00000637775 1455 ntBASIC11.52□□□□□ -0.56
LINC01546A6NGU7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01546A6NGU7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
LINC01546A6NGU7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 PRORSD1P-201ENST00000295112 541 ntBASIC11.52□□□□□ -0.57
LINC01546A6NGU7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC01546A6NGU7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms