Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 UNC93B7-201ENST00000509439 705 ntBASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TCRBV9S1A1TA0A576 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 PMS2P4-201ENST00000412466 1052 ntBASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 CXCL1P1-201ENST00000502804 216 ntBASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV9S1A1TA0A576 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
TCRBV9S1A1TA0A576 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
TCRBV9S1A1TA0A576 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.46■□□□□ 0.22
TCRBV9S1A1TA0A576 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV9S1A1TA0A576 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TCRBV9S1A1TA0A576 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TCRBV9S1A1TA0A576 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TCRBV9S1A1TA0A576 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV9S1A1TA0A576 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.45■□□□□ 0.22
TCRBV9S1A1TA0A576 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV9S1A1TA0A576 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TCRBV9S1A1TA0A576 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV9S1A1TA0A576 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV9S1A1TA0A576 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TCRBV9S1A1TA0A576 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms