Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 MIR7706-201ENST00000613747 67 ntBASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 LINC00554-201ENST00000564841 3011 ntBASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 MIR600HG-201ENST00000449175 5984 ntBASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.4□□□□□ -0.1
RHBDD3Q9Y3P4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
RHBDD3Q9Y3P4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
RHBDD3Q9Y3P4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 OR7E47P-204ENST00000575924 449 ntBASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 CYP2A7P1-201ENST00000595391 815 ntBASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 KRT8P39-201ENST00000396270 1433 ntBASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 AC103702.1-201ENST00000548801 2630 ntBASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.39□□□□□ -0.11
RHBDD3Q9Y3P4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 TPM4P1-201ENST00000436100 807 ntBASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 AC098831.1-202ENST00000438821 336 ntBASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 AC116407.3-201ENST00000623905 1129 ntBASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 AC092384.3-202ENST00000564646 2873 ntBASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 AC010491.1-201ENST00000563101 2797 ntBASIC14.38□□□□□ -0.11
RHBDD3Q9Y3P4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms