Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 SCARNA2-201ENST00000458748 420 ntBASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGB4Q9UN71 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 TOP3BP1-201ENST00000420768 1380 ntBASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGB4Q9UN71 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.93■□□□□ 0.14
PCDHGB4Q9UN71 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms