Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 Z97205.2-201ENST00000564697 1639 ntBASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NPC1L1Q9UHC9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC21.77■■□□□ 1.07
NPC1L1Q9UHC9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
NPC1L1Q9UHC9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 AL390754.1-201ENST00000619088 582 ntBASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPC1L1Q9UHC9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 MIR770-201ENST00000390219 98 ntBASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 SPCS2P1-201ENST00000561636 679 ntBASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 AC009407.1-201ENST00000568958 598 ntBASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPC1L1Q9UHC9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 RN7SL618P-201ENST00000477850 296 ntBASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 DOC2GP-204ENST00000639052 2548 ntBASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.74■■□□□ 1.07
NPC1L1Q9UHC9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms