Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16■□□□□ 0.15
CLK4Q9HAZ1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLK4Q9HAZ1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
CLK4Q9HAZ1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 IGLL3P-201ENST00000412472 434 ntBASIC16■□□□□ 0.15
CLK4Q9HAZ1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16■□□□□ 0.15
CLK4Q9HAZ1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16■□□□□ 0.15
CLK4Q9HAZ1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16■□□□□ 0.15
CLK4Q9HAZ1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16■□□□□ 0.15
CLK4Q9HAZ1 AC013467.2-201ENST00000605472 835 ntBASIC16■□□□□ 0.15
CLK4Q9HAZ1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16■□□□□ 0.15
CLK4Q9HAZ1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16■□□□□ 0.15
CLK4Q9HAZ1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 AC040169.1-201ENST00000565382 521 ntBASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 MIR4515-201ENST00000584082 81 ntBASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 AC023141.13-201ENST00000604991 943 ntBASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 ACTL9-202ENST00000612068 1252 ntBASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.99■□□□□ 0.15
CLK4Q9HAZ1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 PMS2P7-201ENST00000506558 1336 ntBASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 MPDU1-223ENST00000582151 728 ntBASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms