Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAF4Q9BUZ4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAF4Q9BUZ4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAF4Q9BUZ4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAF4Q9BUZ4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAF4Q9BUZ4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAF4Q9BUZ4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAF4Q9BUZ4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAF4Q9BUZ4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAF4Q9BUZ4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAF4Q9BUZ4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAF4Q9BUZ4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.71□□□□□ -0.06
TRAF4Q9BUZ4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAF4Q9BUZ4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 ELL2P1-201ENST00000413990 1906 ntBASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 AC027796.2-201ENST00000575326 344 ntBASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAF4Q9BUZ4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 AL135999.2-201ENST00000622438 1686 ntBASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 CEND1P1-201ENST00000451006 455 ntBASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 AC023141.13-201ENST00000604991 943 ntBASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
TRAF4Q9BUZ4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms