Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 AC241585.1-201ENST00000433527 519 ntBASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 MTND6P24-201ENST00000440466 518 ntBASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 AC027369.6-201ENST00000525520 931 ntBASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 SPCS2P1-201ENST00000561636 679 ntBASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 AL390955.2-201ENST00000603032 514 ntBASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 AL589739.1-201ENST00000607720 493 ntBASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK5RAP1Q96SZ6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 AL512638.1-201ENST00000457493 794 ntBASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 INGX-202ENST00000489074 768 ntBASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 SPDYE12P-201ENST00000618416 771 ntBASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 AL390754.1-201ENST00000619088 582 ntBASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 AJ011932.1-201ENST00000621707 465 ntBASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 FLJ38576-201ENST00000623820 2459 ntBASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDK5RAP1Q96SZ6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 AC046158.3-201ENST00000624947 2558 ntBASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 AGGF1P2-201ENST00000426656 2106 ntBASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms