Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 CDK2AP2P3-201ENST00000422476 372 ntBASIC19■□□□□ 0.63
CHAMP1Q96JM3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19■□□□□ 0.63
CHAMP1Q96JM3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CHAMP1Q96JM3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CHAMP1Q96JM3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 AC012640.2-201ENST00000561606 901 ntBASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 AL592424.1-201ENST00000563624 1536 ntBASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHAMP1Q96JM3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 HNRNPDP1-201ENST00000439535 754 ntBASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CHAMP1Q96JM3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms