Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.67■□□□□ 0.42
ZC3H3Q8IXZ2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
ZC3H3Q8IXZ2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H3Q8IXZ2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ZC3H3Q8IXZ2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H3Q8IXZ2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H3Q8IXZ2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 AC134407.2-201ENST00000625089 1978 ntBASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 RPS8P6-201ENST00000426177 609 ntBASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 AC069335.1-201ENST00000489972 472 ntBASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H3Q8IXZ2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 ELL2P1-201ENST00000413990 1906 ntBASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H3Q8IXZ2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
ZC3H3Q8IXZ2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ZC3H3Q8IXZ2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ZC3H3Q8IXZ2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 EEF1DP4-201ENST00000446006 880 ntBASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 AC105339.1-204ENST00000636249 355 ntBASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms