Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC092384.3-202ENST00000564646 2873 ntBASIC17.38■□□□□ 0.37
CCDC50Q8IVM0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 AC073621.1-201ENST00000392730 636 ntBASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 KRT18P27-201ENST00000427733 1299 ntBASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 AC005412.3-201ENST00000580309 715 ntBASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 AC129492.6-201ENST00000611383 1305 ntBASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC50Q8IVM0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 AC006449.6-201ENST00000612330 2296 ntBASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 KRT18P56-201ENST00000507275 550 ntBASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 RNPS1P1-201ENST00000507437 918 ntBASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC50Q8IVM0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 TCAF2P1-201ENST00000291129 2421 ntBASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms