Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AC117489.1-201ENST00000625169 3217 ntBASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 UBE2SP1-201ENST00000450587 669 ntBASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 ECEL1P2-202ENST00000465689 757 ntBASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 AC113410.3-201ENST00000623366 203 ntBASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 AC010460.3-201ENST00000511359 1579 ntBASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.89□□□□□ -0.03
CROCCP3Q8IVE0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 AC097637.2-201ENST00000624096 1997 ntBASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 EGLN1P1-201ENST00000531623 762 ntBASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 PTENP1-202ENST00000532280 3996 ntBASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CROCCP3Q8IVE0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CROCCP3Q8IVE0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms