Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 FGFR3P6-201ENST00000457012 610 ntBASIC17.82■□□□□ 0.44
CNGA4Q8IV77 FOSL1P1-201ENST00000511041 816 ntBASIC17.82■□□□□ 0.44
CNGA4Q8IV77 KRT18P21-201ENST00000515767 1272 ntBASIC17.82■□□□□ 0.44
CNGA4Q8IV77 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 AC008677.1-201ENST00000519230 1561 ntBASIC17.82■□□□□ 0.44
CNGA4Q8IV77 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNGA4Q8IV77 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 AC023157.3-201ENST00000619086 2088 ntBASIC17.81■□□□□ 0.44
CNGA4Q8IV77 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 LAGE3P1-201ENST00000425356 484 ntBASIC17.81■□□□□ 0.44
CNGA4Q8IV77 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 SCARNA2-201ENST00000458748 420 ntBASIC17.81■□□□□ 0.44
CNGA4Q8IV77 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 AL160237.2-201ENST00000556165 472 ntBASIC17.81■□□□□ 0.44
CNGA4Q8IV77 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNGA4Q8IV77 SSR4P1-203ENST00000599569 2260 ntBASIC17.81■□□□□ 0.44
CNGA4Q8IV77 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 AC008608.2-201ENST00000606089 416 ntBASIC17.8■□□□□ 0.44
CNGA4Q8IV77 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CNGA4Q8IV77 AC099063.4-201ENST00000641099 1602 ntBASIC17.8■□□□□ 0.44
CNGA4Q8IV77 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CNGA4Q8IV77 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.79■□□□□ 0.44
CNGA4Q8IV77 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.79■□□□□ 0.44
CNGA4Q8IV77 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNGA4Q8IV77 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.79■□□□□ 0.44
CNGA4Q8IV77 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.79■□□□□ 0.44
CNGA4Q8IV77 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.79■□□□□ 0.44
CNGA4Q8IV77 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.79■□□□□ 0.44
CNGA4Q8IV77 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.79■□□□□ 0.44
CNGA4Q8IV77 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNGA4Q8IV77 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNGA4Q8IV77 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms