Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB43Q86YS6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RAB43Q86YS6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB43Q86YS6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.71■□□□□ 0.1
RAB43Q86YS6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB43Q86YS6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 AC005052.1-201ENST00000625181 2492 ntBASIC15.7■□□□□ 0.1
RAB43Q86YS6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 RNU1-129P-201ENST00000384064 167 ntBASIC15.7■□□□□ 0.1
RAB43Q86YS6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 PMS2P4-201ENST00000412466 1052 ntBASIC15.7■□□□□ 0.1
RAB43Q86YS6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.7■□□□□ 0.1
RAB43Q86YS6 AC092474.2-201ENST00000424288 719 ntBASIC15.7■□□□□ 0.1
RAB43Q86YS6 SPCS2P4-201ENST00000436160 681 ntBASIC15.7■□□□□ 0.1
RAB43Q86YS6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 U1.21-201ENST00000580816 167 ntBASIC15.7■□□□□ 0.1
RAB43Q86YS6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 AP001059.3-201ENST00000619053 235 ntBASIC15.7■□□□□ 0.1
RAB43Q86YS6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB43Q86YS6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RAB43Q86YS6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 AL512356.2-201ENST00000546955 174 ntBASIC15.69■□□□□ 0.1
RAB43Q86YS6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 AL096865.1-201ENST00000606796 927 ntBASIC15.69■□□□□ 0.1
RAB43Q86YS6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB43Q86YS6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB43Q86YS6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB43Q86YS6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB43Q86YS6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB43Q86YS6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB43Q86YS6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB43Q86YS6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB43Q86YS6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB43Q86YS6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms