Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 PCGF3-213ENST00000620529 1899 ntBASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 SDHAP3-202ENST00000515467 728 ntBASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 KRT17P8-201ENST00000540749 863 ntBASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 AC044860.1-202ENST00000559481 777 ntBASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 RAB43P1-201ENST00000561790 589 ntBASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC149Q6ZUS6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 AC079776.1-201ENST00000401540 1152 ntBASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 AC114501.2-201ENST00000439631 535 ntBASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 AL365330.1-201ENST00000607459 531 ntBASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 CROCCP1-201ENST00000426910 5675 ntBASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 SLC7A15P-201ENST00000424028 1363 ntBASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC149Q6ZUS6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 LINC01144-201ENST00000626198 1710 ntBASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 MIR658-201ENST00000385210 100 ntBASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 AC004790.1-201ENST00000612686 536 ntBASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC149Q6ZUS6 AL603756.1-201ENST00000606511 2163 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms