Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDR2Q01850 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.47■□□□□ 0.39
CDR2Q01850 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDR2Q01850 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDR2Q01850 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
CDR2Q01850 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDR2Q01850 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.47■□□□□ 0.39
CDR2Q01850 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDR2Q01850 AC026396.1-201ENST00000419388 421 ntBASIC17.47■□□□□ 0.39
CDR2Q01850 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.47■□□□□ 0.39
CDR2Q01850 AL591424.1-201ENST00000442569 1213 ntBASIC17.47■□□□□ 0.39
CDR2Q01850 RNA5SP416-201ENST00000516838 111 ntBASIC17.47■□□□□ 0.39
CDR2Q01850 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.47■□□□□ 0.39
CDR2Q01850 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.47■□□□□ 0.39
CDR2Q01850 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.47■□□□□ 0.39
CDR2Q01850 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.47■□□□□ 0.39
CDR2Q01850 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.47■□□□□ 0.39
CDR2Q01850 AC027601.4-201ENST00000611259 610 ntBASIC17.47■□□□□ 0.39
CDR2Q01850 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CDR2Q01850 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.47■□□□□ 0.39
CDR2Q01850 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDR2Q01850 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDR2Q01850 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDR2Q01850 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDR2Q01850 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDR2Q01850 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDR2Q01850 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.47■□□□□ 0.39
CDR2Q01850 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.47■□□□□ 0.39
CDR2Q01850 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDR2Q01850 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.46■□□□□ 0.39
CDR2Q01850 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.46■□□□□ 0.39
CDR2Q01850 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.46■□□□□ 0.39
CDR2Q01850 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 MIR648-201ENST00000385046 94 ntBASIC17.46■□□□□ 0.39
CDR2Q01850 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDR2Q01850 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CDR2Q01850 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 AP002472.1-201ENST00000577490 586 ntBASIC17.46■□□□□ 0.39
CDR2Q01850 AC140113.2-201ENST00000604370 208 ntBASIC17.46■□□□□ 0.39
CDR2Q01850 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.46■□□□□ 0.39
CDR2Q01850 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 AC010491.1-201ENST00000563101 2797 ntBASIC17.46■□□□□ 0.39
CDR2Q01850 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.46■□□□□ 0.39
CDR2Q01850 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDR2Q01850 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.46■□□□□ 0.39
CDR2Q01850 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.46■□□□□ 0.39
CDR2Q01850 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.46■□□□□ 0.39
CDR2Q01850 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDR2Q01850 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.46■□□□□ 0.38
CDR2Q01850 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CDR2Q01850 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CDR2Q01850 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDR2Q01850 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDR2Q01850 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.45■□□□□ 0.38
CDR2Q01850 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDR2Q01850 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CDR2Q01850 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.45■□□□□ 0.38
CDR2Q01850 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDR2Q01850 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.45■□□□□ 0.38
CDR2Q01850 MED15P5-201ENST00000423150 992 ntBASIC17.45■□□□□ 0.38
CDR2Q01850 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.45■□□□□ 0.38
CDR2Q01850 KRT18P3-201ENST00000451602 1288 ntBASIC17.45■□□□□ 0.38
CDR2Q01850 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.45■□□□□ 0.38
CDR2Q01850 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.45■□□□□ 0.38
CDR2Q01850 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.45■□□□□ 0.38
CDR2Q01850 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDR2Q01850 FAM197Y3-203ENST00000618346 717 ntBASIC17.45■□□□□ 0.38
CDR2Q01850 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
CDR2Q01850 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.45■□□□□ 0.38
CDR2Q01850 AC092865.6-201ENST00000642101 219 ntBASIC17.45■□□□□ 0.38
CDR2Q01850 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.45■□□□□ 0.38
CDR2Q01850 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDR2Q01850 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms