Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.12□□□□□ -0.15
AP3S2P59780 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
AP3S2P59780 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S2P59780 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
AP3S2P59780 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.11□□□□□ -0.15
AP3S2P59780 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.11□□□□□ -0.15
AP3S2P59780 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.11□□□□□ -0.15
AP3S2P59780 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.11□□□□□ -0.15
AP3S2P59780 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
AP3S2P59780 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
AP3S2P59780 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 CICP13-201ENST00000422015 2789 ntBASIC14.11□□□□□ -0.15
AP3S2P59780 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.11□□□□□ -0.15
AP3S2P59780 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.11□□□□□ -0.15
AP3S2P59780 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.11□□□□□ -0.15
AP3S2P59780 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.11□□□□□ -0.15
AP3S2P59780 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.11□□□□□ -0.15
AP3S2P59780 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.11□□□□□ -0.15
AP3S2P59780 AC087481.3-201ENST00000602886 1894 ntBASIC14.11□□□□□ -0.15
AP3S2P59780 AC140113.3-201ENST00000605663 199 ntBASIC14.11□□□□□ -0.15
AP3S2P59780 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 AC141257.4-201ENST00000634557 245 ntBASIC14.11□□□□□ -0.15
AP3S2P59780 AC136944.6-201ENST00000634818 245 ntBASIC14.11□□□□□ -0.15
AP3S2P59780 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
AP3S2P59780 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.11□□□□□ -0.15
AP3S2P59780 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.11□□□□□ -0.15
AP3S2P59780 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.11□□□□□ -0.15
AP3S2P59780 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
AP3S2P59780 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.11□□□□□ -0.15
AP3S2P59780 AC005089.1-201ENST00000619486 2241 ntBASIC14.11□□□□□ -0.15
AP3S2P59780 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.11□□□□□ -0.15
AP3S2P59780 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.11□□□□□ -0.15
AP3S2P59780 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.11□□□□□ -0.15
AP3S2P59780 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S2P59780 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.1□□□□□ -0.15
AP3S2P59780 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.1□□□□□ -0.15
AP3S2P59780 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.1□□□□□ -0.15
AP3S2P59780 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
AP3S2P59780 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.1□□□□□ -0.15
AP3S2P59780 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.1□□□□□ -0.15
AP3S2P59780 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.1□□□□□ -0.15
AP3S2P59780 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
AP3S2P59780 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 GPAA1P2-202ENST00000606848 1787 ntBASIC14.1□□□□□ -0.15
AP3S2P59780 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.1□□□□□ -0.15
AP3S2P59780 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.1□□□□□ -0.15
AP3S2P59780 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.1□□□□□ -0.15
AP3S2P59780 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.1□□□□□ -0.15
AP3S2P59780 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.1□□□□□ -0.15
AP3S2P59780 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.1□□□□□ -0.15
AP3S2P59780 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.1□□□□□ -0.15
AP3S2P59780 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.1□□□□□ -0.15
AP3S2P59780 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.1□□□□□ -0.15
AP3S2P59780 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 AC073592.5-201ENST00000624854 528 ntBASIC14.1□□□□□ -0.15
AP3S2P59780 PGM5P2-202ENST00000637225 1043 ntBASIC14.1□□□□□ -0.15
AP3S2P59780 AL031432.5-201ENST00000641059 760 ntBASIC14.1□□□□□ -0.15
AP3S2P59780 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
AP3S2P59780 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
AP3S2P59780 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 TCAF2P1-201ENST00000291129 2421 ntBASIC14.1□□□□□ -0.15
AP3S2P59780 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms