Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FAM3BP58499 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
FAM3BP58499 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.84□□□□□ -0.35
FAM3BP58499 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
FAM3BP58499 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.84□□□□□ -0.35
FAM3BP58499 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
FAM3BP58499 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
FAM3BP58499 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
FAM3BP58499 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
FAM3BP58499 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
FAM3BP58499 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
FAM3BP58499 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.83□□□□□ -0.35
FAM3BP58499 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
FAM3BP58499 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.83□□□□□ -0.35
FAM3BP58499 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
FAM3BP58499 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
FAM3BP58499 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
FAM3BP58499 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 KRT18P38-201ENST00000449496 1282 ntBASIC12.83□□□□□ -0.36
FAM3BP58499 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.83□□□□□ -0.36
FAM3BP58499 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.83□□□□□ -0.36
FAM3BP58499 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.83□□□□□ -0.36
FAM3BP58499 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.83□□□□□ -0.36
FAM3BP58499 HYMAI.1-201ENST00000620949 238 ntBASIC12.83□□□□□ -0.36
FAM3BP58499 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.83□□□□□ -0.36
FAM3BP58499 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.83□□□□□ -0.36
FAM3BP58499 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
FAM3BP58499 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.83□□□□□ -0.36
FAM3BP58499 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.83□□□□□ -0.36
FAM3BP58499 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
FAM3BP58499 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
FAM3BP58499 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
FAM3BP58499 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.82□□□□□ -0.36
FAM3BP58499 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.82□□□□□ -0.36
FAM3BP58499 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.82□□□□□ -0.36
FAM3BP58499 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.82□□□□□ -0.36
FAM3BP58499 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 HBZP1-201ENST00000354915 429 ntBASIC12.82□□□□□ -0.36
FAM3BP58499 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
FAM3BP58499 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.82□□□□□ -0.36
FAM3BP58499 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 AC002558.1-201ENST00000488906 803 ntBASIC12.82□□□□□ -0.36
FAM3BP58499 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.82□□□□□ -0.36
FAM3BP58499 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.82□□□□□ -0.36
FAM3BP58499 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.82□□□□□ -0.36
FAM3BP58499 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
FAM3BP58499 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
FAM3BP58499 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.82□□□□□ -0.36
FAM3BP58499 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
FAM3BP58499 AC083849.1-201ENST00000615227 514 ntBASIC12.82□□□□□ -0.36
FAM3BP58499 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.82□□□□□ -0.36
FAM3BP58499 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
FAM3BP58499 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
FAM3BP58499 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms