Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNB2P52799 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.21□□□□□ -0.13
EFNB2P52799 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
EFNB2P52799 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 AL022342.1-201ENST00000400363 863 ntBASIC14.21□□□□□ -0.13
EFNB2P52799 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
EFNB2P52799 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.21□□□□□ -0.13
EFNB2P52799 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.21□□□□□ -0.13
EFNB2P52799 BX005266.1-201ENST00000473402 457 ntBASIC14.21□□□□□ -0.13
EFNB2P52799 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.21□□□□□ -0.13
EFNB2P52799 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.21□□□□□ -0.13
EFNB2P52799 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.21□□□□□ -0.13
EFNB2P52799 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
EFNB2P52799 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
EFNB2P52799 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB2P52799 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.21□□□□□ -0.14
EFNB2P52799 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB2P52799 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
EFNB2P52799 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
EFNB2P52799 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 HLA-A-201ENST00000376802 1334 ntBASIC14.2□□□□□ -0.14
EFNB2P52799 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB2P52799 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNB2P52799 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
EFNB2P52799 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB2P52799 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNB2P52799 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNB2P52799 AC079776.4-201ENST00000511039 504 ntBASIC14.2□□□□□ -0.14
EFNB2P52799 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EFNB2P52799 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.2□□□□□ -0.14
EFNB2P52799 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNB2P52799 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.2□□□□□ -0.14
EFNB2P52799 AC010654.1-201ENST00000615722 808 ntBASIC14.2□□□□□ -0.14
EFNB2P52799 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EFNB2P52799 TP73-AS1-207ENST00000624167 988 ntBASIC14.2□□□□□ -0.14
EFNB2P52799 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB2P52799 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNB2P52799 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNB2P52799 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB2P52799 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.2□□□□□ -0.14
EFNB2P52799 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
EFNB2P52799 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB2P52799 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
EFNB2P52799 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
EFNB2P52799 AC016027.1-202ENST00000607927 1699 ntBASIC14.2□□□□□ -0.14
EFNB2P52799 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.2□□□□□ -0.14
EFNB2P52799 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
EFNB2P52799 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
EFNB2P52799 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
EFNB2P52799 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB2P52799 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.19□□□□□ -0.14
EFNB2P52799 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB2P52799 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
EFNB2P52799 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB2P52799 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB2P52799 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.19□□□□□ -0.14
EFNB2P52799 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
EFNB2P52799 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms