Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.45□□□□□ -0.1
CX3CR1P49238 AL513480.1-201ENST00000451731 511 ntBASIC14.45□□□□□ -0.1
CX3CR1P49238 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.45□□□□□ -0.1
CX3CR1P49238 AC093909.1-201ENST00000504731 1122 ntBASIC14.45□□□□□ -0.1
CX3CR1P49238 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.45□□□□□ -0.1
CX3CR1P49238 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CX3CR1P49238 AL160237.2-201ENST00000556165 472 ntBASIC14.45□□□□□ -0.1
CX3CR1P49238 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.45□□□□□ -0.1
CX3CR1P49238 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.45□□□□□ -0.1
CX3CR1P49238 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.45□□□□□ -0.1
CX3CR1P49238 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.45□□□□□ -0.1
CX3CR1P49238 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.45□□□□□ -0.1
CX3CR1P49238 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CX3CR1P49238 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CX3CR1P49238 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CX3CR1P49238 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CX3CR1P49238 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CX3CR1P49238 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 REXO1L8P-201ENST00000604378 1897 ntBASIC14.44□□□□□ -0.1
CX3CR1P49238 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
CX3CR1P49238 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
CX3CR1P49238 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.44□□□□□ -0.1
CX3CR1P49238 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CX3CR1P49238 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.44□□□□□ -0.1
CX3CR1P49238 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.44□□□□□ -0.1
CX3CR1P49238 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.44□□□□□ -0.1
CX3CR1P49238 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.44□□□□□ -0.1
CX3CR1P49238 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CX3CR1P49238 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.44□□□□□ -0.1
CX3CR1P49238 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.44□□□□□ -0.1
CX3CR1P49238 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CX3CR1P49238 AC104692.2-201ENST00000603054 253 ntBASIC14.44□□□□□ -0.1
CX3CR1P49238 AL031055.1-201ENST00000606362 631 ntBASIC14.44□□□□□ -0.1
CX3CR1P49238 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.44□□□□□ -0.1
CX3CR1P49238 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CX3CR1P49238 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.44□□□□□ -0.1
CX3CR1P49238 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.44□□□□□ -0.1
CX3CR1P49238 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.44□□□□□ -0.1
CX3CR1P49238 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CX3CR1P49238 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CX3CR1P49238 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.44□□□□□ -0.1
CX3CR1P49238 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CX3CR1P49238 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CX3CR1P49238 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CX3CR1P49238 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CX3CR1P49238 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.43□□□□□ -0.1
CX3CR1P49238 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 NORAD-201ENST00000565493 5339 ntBASIC14.43□□□□□ -0.1
CX3CR1P49238 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.43□□□□□ -0.1
CX3CR1P49238 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.43□□□□□ -0.1
CX3CR1P49238 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.43□□□□□ -0.1
CX3CR1P49238 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CX3CR1P49238 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 UNC93B6-202ENST00000528242 690 ntBASIC14.43□□□□□ -0.1
CX3CR1P49238 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CX3CR1P49238 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms