Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.48□□□□□ -0.09
SOX2P48431 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 PMS2P1-201ENST00000431037 1228 ntBASIC14.48□□□□□ -0.09
SOX2P48431 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.48□□□□□ -0.09
SOX2P48431 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.48□□□□□ -0.09
SOX2P48431 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.48□□□□□ -0.09
SOX2P48431 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.48□□□□□ -0.09
SOX2P48431 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 PI4KAP1-204ENST00000612579 1703 ntBASIC14.48□□□□□ -0.09
SOX2P48431 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.48□□□□□ -0.09
SOX2P48431 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SOX2P48431 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.48□□□□□ -0.09
SOX2P48431 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SOX2P48431 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.48□□□□□ -0.09
SOX2P48431 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.48□□□□□ -0.09
SOX2P48431 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.47□□□□□ -0.09
SOX2P48431 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.47□□□□□ -0.09
SOX2P48431 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SOX2P48431 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.47□□□□□ -0.09
SOX2P48431 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.47□□□□□ -0.09
SOX2P48431 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.47□□□□□ -0.09
SOX2P48431 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.47□□□□□ -0.09
SOX2P48431 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.47□□□□□ -0.09
SOX2P48431 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 CYP2A7P1-201ENST00000595391 815 ntBASIC14.47□□□□□ -0.09
SOX2P48431 NPAP1P7-201ENST00000613027 823 ntBASIC14.47□□□□□ -0.09
SOX2P48431 AL589182.2-201ENST00000619332 1049 ntBASIC14.47□□□□□ -0.09
SOX2P48431 REXO1L3P-201ENST00000622202 1288 ntBASIC14.47□□□□□ -0.09
SOX2P48431 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.47□□□□□ -0.09
SOX2P48431 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SOX2P48431 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SOX2P48431 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SOX2P48431 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 AL356309.3-201ENST00000624132 1934 ntBASIC14.47□□□□□ -0.09
SOX2P48431 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SOX2P48431 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.46□□□□□ -0.09
SOX2P48431 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 PCDHA3-202ENST00000532566 4594 ntBASIC14.46□□□□□ -0.09
SOX2P48431 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.46□□□□□ -0.09
SOX2P48431 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.46□□□□□ -0.09
SOX2P48431 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.46□□□□□ -0.09
SOX2P48431 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.46□□□□□ -0.09
SOX2P48431 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SOX2P48431 KRT16P4-201ENST00000453883 522 ntBASIC14.46□□□□□ -0.09
SOX2P48431 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.46□□□□□ -0.09
SOX2P48431 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms