Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-1P43699 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.47□□□□□ -0.25
NKX2-1P43699 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-1P43699 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NKX2-1P43699 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NKX2-1P43699 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NKX2-1P43699 GPAA1P2-202ENST00000606848 1787 ntBASIC13.47□□□□□ -0.25
NKX2-1P43699 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-1P43699 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.47□□□□□ -0.25
NKX2-1P43699 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.47□□□□□ -0.25
NKX2-1P43699 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
NKX2-1P43699 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.47□□□□□ -0.25
NKX2-1P43699 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
NKX2-1P43699 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NKX2-1P43699 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NKX2-1P43699 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NKX2-1P43699 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
NKX2-1P43699 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-1P43699 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-1P43699 FAM45BP-202ENST00000592932 1624 ntBASIC13.46□□□□□ -0.25
NKX2-1P43699 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NKX2-1P43699 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NKX2-1P43699 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-1P43699 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
NKX2-1P43699 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-1P43699 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-1P43699 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.46□□□□□ -0.25
NKX2-1P43699 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.46□□□□□ -0.25
NKX2-1P43699 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.46□□□□□ -0.25
NKX2-1P43699 SPDYE13P-201ENST00000445314 798 ntBASIC13.46□□□□□ -0.25
NKX2-1P43699 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-1P43699 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.46□□□□□ -0.25
NKX2-1P43699 AC063952.2-201ENST00000498792 1227 ntBASIC13.46□□□□□ -0.25
NKX2-1P43699 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.46□□□□□ -0.25
NKX2-1P43699 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-1P43699 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
NKX2-1P43699 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.46□□□□□ -0.25
NKX2-1P43699 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NKX2-1P43699 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.46□□□□□ -0.25
NKX2-1P43699 TP73-AS1-210ENST00000637775 1455 ntBASIC13.46□□□□□ -0.25
NKX2-1P43699 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.46□□□□□ -0.26
NKX2-1P43699 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
NKX2-1P43699 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-1P43699 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-1P43699 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-1P43699 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-1P43699 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-1P43699 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.46□□□□□ -0.26
NKX2-1P43699 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-1P43699 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.46□□□□□ -0.26
NKX2-1P43699 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-1P43699 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
NKX2-1P43699 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-1P43699 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-1P43699 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX2-1P43699 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX2-1P43699 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NKX2-1P43699 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NKX2-1P43699 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX2-1P43699 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms