Protein–RNA interactions for Protein: P29508

SERPINB3, Serpin B3, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINB3P29508 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SERPINB3P29508 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.37■□□□□ 0.21
SERPINB3P29508 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.37■□□□□ 0.21
SERPINB3P29508 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.37■□□□□ 0.21
SERPINB3P29508 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.37■□□□□ 0.21
SERPINB3P29508 NKAPP1-205ENST00000585790 367 ntBASIC16.37■□□□□ 0.21
SERPINB3P29508 AL732292.2-201ENST00000609649 430 ntBASIC16.37■□□□□ 0.21
SERPINB3P29508 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.37■□□□□ 0.21
SERPINB3P29508 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SERPINB3P29508 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.37■□□□□ 0.21
SERPINB3P29508 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.37■□□□□ 0.21
SERPINB3P29508 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SERPINB3P29508 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
SERPINB3P29508 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SERPINB3P29508 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SERPINB3P29508 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.37■□□□□ 0.21
SERPINB3P29508 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SERPINB3P29508 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SERPINB3P29508 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SERPINB3P29508 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
SERPINB3P29508 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
SERPINB3P29508 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
SERPINB3P29508 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.36■□□□□ 0.21
SERPINB3P29508 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 TPM4P1-201ENST00000436100 807 ntBASIC16.36■□□□□ 0.21
SERPINB3P29508 PRYP5-201ENST00000451909 266 ntBASIC16.36■□□□□ 0.21
SERPINB3P29508 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.36■□□□□ 0.21
SERPINB3P29508 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.36■□□□□ 0.21
SERPINB3P29508 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SERPINB3P29508 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.36■□□□□ 0.21
SERPINB3P29508 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.36■□□□□ 0.21
SERPINB3P29508 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SERPINB3P29508 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.36■□□□□ 0.21
SERPINB3P29508 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.36■□□□□ 0.21
SERPINB3P29508 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.36■□□□□ 0.21
SERPINB3P29508 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SERPINB3P29508 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SERPINB3P29508 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 CDC14C-201ENST00000428251 1719 ntBASIC16.36■□□□□ 0.21
SERPINB3P29508 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SERPINB3P29508 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.36■□□□□ 0.21
SERPINB3P29508 LINC02447-202ENST00000501888 2146 ntBASIC16.36■□□□□ 0.21
SERPINB3P29508 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SERPINB3P29508 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.35■□□□□ 0.21
SERPINB3P29508 AC112504.1-201ENST00000623415 1841 ntBASIC16.35■□□□□ 0.21
SERPINB3P29508 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.35■□□□□ 0.21
SERPINB3P29508 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.35■□□□□ 0.21
SERPINB3P29508 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SERPINB3P29508 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.35■□□□□ 0.21
SERPINB3P29508 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 IFNL4P1-201ENST00000607083 540 ntBASIC16.35■□□□□ 0.21
SERPINB3P29508 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.35■□□□□ 0.21
SERPINB3P29508 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.35■□□□□ 0.21
SERPINB3P29508 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SERPINB3P29508 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.35■□□□□ 0.21
SERPINB3P29508 REXO1L8P-201ENST00000604378 1897 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms