Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
KCNA3P22001 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 C1QBPP1-201ENST00000400117 770 ntBASIC19.77■□□□□ 0.76
KCNA3P22001 FXNP2-201ENST00000411625 547 ntBASIC19.77■□□□□ 0.76
KCNA3P22001 KRT18P64-201ENST00000434946 1219 ntBASIC19.77■□□□□ 0.76
KCNA3P22001 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.77■□□□□ 0.76
KCNA3P22001 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
KCNA3P22001 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.77■□□□□ 0.76
KCNA3P22001 AL008638.5-201ENST00000623814 1298 ntBASIC19.77■□□□□ 0.76
KCNA3P22001 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.77■□□□□ 0.76
KCNA3P22001 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KCNA3P22001 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KCNA3P22001 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KCNA3P22001 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
KCNA3P22001 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KCNA3P22001 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.76■□□□□ 0.75
KCNA3P22001 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.76■□□□□ 0.75
KCNA3P22001 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KCNA3P22001 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
KCNA3P22001 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
KCNA3P22001 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.76■□□□□ 0.75
KCNA3P22001 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.76■□□□□ 0.75
KCNA3P22001 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.76■□□□□ 0.75
KCNA3P22001 AP001063.1-201ENST00000568332 529 ntBASIC19.76■□□□□ 0.75
KCNA3P22001 MIR4722-201ENST00000578292 60 ntBASIC19.76■□□□□ 0.75
KCNA3P22001 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KCNA3P22001 AC135050.7-201ENST00000624508 2218 ntBASIC19.76■□□□□ 0.75
KCNA3P22001 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.76■□□□□ 0.75
KCNA3P22001 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNA3P22001 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.76■□□□□ 0.75
KCNA3P22001 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
KCNA3P22001 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.76■□□□□ 0.75
KCNA3P22001 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.75■□□□□ 0.75
KCNA3P22001 AC008764.6-201ENST00000595909 2069 ntBASIC19.75■□□□□ 0.75
KCNA3P22001 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.75■□□□□ 0.75
KCNA3P22001 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.75■□□□□ 0.75
KCNA3P22001 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KCNA3P22001 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.75■□□□□ 0.75
KCNA3P22001 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.75■□□□□ 0.75
KCNA3P22001 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.75■□□□□ 0.75
KCNA3P22001 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.75■□□□□ 0.75
KCNA3P22001 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.75■□□□□ 0.75
KCNA3P22001 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.75■□□□□ 0.75
KCNA3P22001 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.75■□□□□ 0.75
KCNA3P22001 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
KCNA3P22001 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNA3P22001 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.75■□□□□ 0.75
KCNA3P22001 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
KCNA3P22001 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KCNA3P22001 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KCNA3P22001 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.74■□□□□ 0.75
KCNA3P22001 CROCCP2-202ENST00000412962 2773 ntBASIC19.74■□□□□ 0.75
KCNA3P22001 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA3P22001 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA3P22001 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.74■□□□□ 0.75
KCNA3P22001 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA3P22001 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.74■□□□□ 0.75
KCNA3P22001 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA3P22001 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
KCNA3P22001 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KCNA3P22001 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA3P22001 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
KCNA3P22001 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA3P22001 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KCNA3P22001 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNA3P22001 VDAC1P7-201ENST00000462417 847 ntBASIC19.74■□□□□ 0.75
KCNA3P22001 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms