Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
P04436 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.94□□□□□ -0.02
P04436 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.94□□□□□ -0.02
P04436 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.94□□□□□ -0.02
P04436 AC005498.2-205ENST00000593218 784 ntBASIC14.94□□□□□ -0.02
P04436 AL158211.3-201ENST00000607385 239 ntBASIC14.94□□□□□ -0.02
P04436 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
P04436 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
P04436 FO538757.1-201ENST00000623083 1397 ntBASIC14.94□□□□□ -0.02
P04436 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
P04436 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.94□□□□□ -0.02
P04436 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P04436 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.94□□□□□ -0.02
P04436 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.94□□□□□ -0.02
P04436 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
P04436 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
P04436 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.93□□□□□ -0.02
P04436 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.93□□□□□ -0.02
P04436 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.93□□□□□ -0.02
P04436 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.93□□□□□ -0.02
P04436 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
P04436 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.93□□□□□ -0.02
P04436 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.93□□□□□ -0.02
P04436 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.93□□□□□ -0.02
P04436 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
P04436 AD000864.1-201ENST00000624076 2295 ntBASIC14.93□□□□□ -0.02
P04436 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.93□□□□□ -0.02
P04436 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.93□□□□□ -0.02
P04436 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 AL512638.1-201ENST00000457493 794 ntBASIC14.93□□□□□ -0.02
P04436 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.93□□□□□ -0.02
P04436 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.93□□□□□ -0.02
P04436 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
P04436 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.93□□□□□ -0.02
P04436 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
P04436 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
P04436 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
P04436 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.92□□□□□ -0.02
P04436 LTB4R2-202ENST00000528054 3092 ntBASIC14.92□□□□□ -0.02
P04436 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.92□□□□□ -0.02
P04436 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
P04436 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
P04436 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.92□□□□□ -0.02
P04436 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.92□□□□□ -0.02
P04436 MTND6P24-201ENST00000440466 518 ntBASIC14.92□□□□□ -0.02
P04436 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.92□□□□□ -0.02
P04436 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.92□□□□□ -0.02
P04436 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 AC026979.3-201ENST00000607315 403 ntBASIC14.92□□□□□ -0.02
P04436 AL365330.1-201ENST00000607459 531 ntBASIC14.92□□□□□ -0.02
P04436 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.92□□□□□ -0.02
P04436 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.92□□□□□ -0.02
P04436 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.92□□□□□ -0.02
P04436 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.92□□□□□ -0.02
P04436 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
P04436 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
P04436 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.92□□□□□ -0.02
P04436 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.92□□□□□ -0.02
P04436 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
P04436 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms