Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD3DP04234 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CD3DP04234 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.94□□□□□ -0.18
CD3DP04234 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.94□□□□□ -0.18
CD3DP04234 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.94□□□□□ -0.18
CD3DP04234 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.94□□□□□ -0.18
CD3DP04234 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 ABR-204ENST00000543210 1049 ntTSL 2 BASIC13.94□□□□□ -0.18
CD3DP04234 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 ABR-217ENST00000572441 563 ntTSL 4 BASIC13.94□□□□□ -0.18
CD3DP04234 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.94□□□□□ -0.18
CD3DP04234 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 AP000867.4-201ENST00000641616 219 ntBASIC13.94□□□□□ -0.18
CD3DP04234 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CD3DP04234 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.94□□□□□ -0.18
CD3DP04234 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.94□□□□□ -0.18
CD3DP04234 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.94□□□□□ -0.18
CD3DP04234 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CD3DP04234 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.94□□□□□ -0.18
CD3DP04234 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.94□□□□□ -0.18
CD3DP04234 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD3DP04234 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CD3DP04234 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.94□□□□□ -0.18
CD3DP04234 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.94□□□□□ -0.18
CD3DP04234 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CD3DP04234 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.93□□□□□ -0.18
CD3DP04234 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.93□□□□□ -0.18
CD3DP04234 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.93□□□□□ -0.18
CD3DP04234 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.93□□□□□ -0.18
CD3DP04234 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.93□□□□□ -0.18
CD3DP04234 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 SIGLEC16-201ENST00000599858 1437 ntBASIC13.93□□□□□ -0.18
CD3DP04234 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CD3DP04234 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.93□□□□□ -0.18
CD3DP04234 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.93□□□□□ -0.18
CD3DP04234 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.93□□□□□ -0.18
CD3DP04234 AL137013.1-201ENST00000432946 1228 ntBASIC13.93□□□□□ -0.18
CD3DP04234 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.93□□□□□ -0.18
CD3DP04234 AP005901.3-202ENST00000581653 237 ntBASIC13.93□□□□□ -0.18
CD3DP04234 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.93□□□□□ -0.18
CD3DP04234 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD3DP04234 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.93□□□□□ -0.18
CD3DP04234 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.93□□□□□ -0.18
CD3DP04234 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.93□□□□□ -0.18
CD3DP04234 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD3DP04234 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.93□□□□□ -0.18
CD3DP04234 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.93□□□□□ -0.18
CD3DP04234 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.93□□□□□ -0.18
CD3DP04234 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CD3DP04234 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.93□□□□□ -0.18
CD3DP04234 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CD3DP04234 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.93□□□□□ -0.18
CD3DP04234 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.93□□□□□ -0.18
CD3DP04234 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CD3DP04234 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CD3DP04234 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD3DP04234 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD3DP04234 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD3DP04234 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CD3DP04234 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CD3DP04234 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD3DP04234 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms