Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.16■□□□□ 0.34
OPHN1O60890 AC129492.6-201ENST00000611383 1305 ntBASIC17.16■□□□□ 0.34
OPHN1O60890 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
OPHN1O60890 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.16■□□□□ 0.34
OPHN1O60890 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.16■□□□□ 0.34
OPHN1O60890 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
OPHN1O60890 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
OPHN1O60890 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
OPHN1O60890 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.15■□□□□ 0.34
OPHN1O60890 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.15■□□□□ 0.34
OPHN1O60890 AC074386.1-202ENST00000463561 864 ntBASIC17.15■□□□□ 0.34
OPHN1O60890 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
OPHN1O60890 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.15■□□□□ 0.34
OPHN1O60890 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.15■□□□□ 0.34
OPHN1O60890 AL353732.1-201ENST00000569618 1459 ntBASIC17.15■□□□□ 0.34
OPHN1O60890 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
OPHN1O60890 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
OPHN1O60890 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
OPHN1O60890 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.15■□□□□ 0.34
OPHN1O60890 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.15■□□□□ 0.34
OPHN1O60890 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OPHN1O60890 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.15■□□□□ 0.34
OPHN1O60890 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
OPHN1O60890 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
OPHN1O60890 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
OPHN1O60890 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
OPHN1O60890 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.14■□□□□ 0.33
OPHN1O60890 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
OPHN1O60890 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.14■□□□□ 0.33
OPHN1O60890 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.14■□□□□ 0.33
OPHN1O60890 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.14■□□□□ 0.33
OPHN1O60890 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.14■□□□□ 0.33
OPHN1O60890 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.14■□□□□ 0.33
OPHN1O60890 BCRP1-201ENST00000444246 691 ntBASIC17.14■□□□□ 0.33
OPHN1O60890 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.14■□□□□ 0.33
OPHN1O60890 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.14■□□□□ 0.33
OPHN1O60890 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.14■□□□□ 0.33
OPHN1O60890 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.14■□□□□ 0.33
OPHN1O60890 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.14■□□□□ 0.33
OPHN1O60890 AC005412.3-201ENST00000580309 715 ntBASIC17.14■□□□□ 0.33
OPHN1O60890 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.14■□□□□ 0.33
OPHN1O60890 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.14■□□□□ 0.33
OPHN1O60890 AC093512.1-201ENST00000617969 520 ntBASIC17.14■□□□□ 0.33
OPHN1O60890 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.14■□□□□ 0.33
OPHN1O60890 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
OPHN1O60890 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.14■□□□□ 0.33
OPHN1O60890 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.14■□□□□ 0.33
OPHN1O60890 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
OPHN1O60890 CYP2T1P-202ENST00000641596 2535 ntBASIC17.14■□□□□ 0.33
OPHN1O60890 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
OPHN1O60890 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.14■□□□□ 0.33
OPHN1O60890 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.14■□□□□ 0.33
OPHN1O60890 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
OPHN1O60890 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OPHN1O60890 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.13■□□□□ 0.33
OPHN1O60890 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
OPHN1O60890 KRT8P39-201ENST00000396270 1433 ntBASIC17.13■□□□□ 0.33
OPHN1O60890 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
OPHN1O60890 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
OPHN1O60890 ME2P1-201ENST00000426028 1970 ntBASIC17.13■□□□□ 0.33
OPHN1O60890 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OPHN1O60890 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms