Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRRM3A6NNA2 AL139400.1-201ENST00000366220 510 ntBASIC17.02■□□□□ 0.32
SRRM3A6NNA2 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.02■□□□□ 0.32
SRRM3A6NNA2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.02■□□□□ 0.32
SRRM3A6NNA2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRRM3A6NNA2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.02■□□□□ 0.32
SRRM3A6NNA2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.02■□□□□ 0.32
SRRM3A6NNA2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.02■□□□□ 0.32
SRRM3A6NNA2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SRRM3A6NNA2 NKAPP1-205ENST00000585790 367 ntBASIC17.02■□□□□ 0.32
SRRM3A6NNA2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.02■□□□□ 0.32
SRRM3A6NNA2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.02■□□□□ 0.32
SRRM3A6NNA2 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.02■□□□□ 0.32
SRRM3A6NNA2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 LINC00895-201ENST00000629028 1637 ntBASIC17.02■□□□□ 0.31
SRRM3A6NNA2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRRM3A6NNA2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 LAGE3P1-201ENST00000425356 484 ntBASIC17.01■□□□□ 0.31
SRRM3A6NNA2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 AC004449.1-201ENST00000564240 433 ntBASIC17.01■□□□□ 0.31
SRRM3A6NNA2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 AL008721.1-201ENST00000609964 604 ntBASIC17.01■□□□□ 0.31
SRRM3A6NNA2 Z92544.3-201ENST00000624747 417 ntBASIC17.01■□□□□ 0.31
SRRM3A6NNA2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM3A6NNA2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17■□□□□ 0.31
SRRM3A6NNA2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRRM3A6NNA2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17■□□□□ 0.31
SRRM3A6NNA2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
SRRM3A6NNA2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRRM3A6NNA2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17■□□□□ 0.31
SRRM3A6NNA2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SRRM3A6NNA2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17■□□□□ 0.31
SRRM3A6NNA2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SRRM3A6NNA2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17■□□□□ 0.31
SRRM3A6NNA2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SRRM3A6NNA2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRRM3A6NNA2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRRM3A6NNA2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17■□□□□ 0.31
SRRM3A6NNA2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17■□□□□ 0.31
SRRM3A6NNA2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17■□□□□ 0.31
SRRM3A6NNA2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRRM3A6NNA2 AC108751.1-201ENST00000490852 363 ntBASIC17■□□□□ 0.31
SRRM3A6NNA2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17■□□□□ 0.31
SRRM3A6NNA2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17■□□□□ 0.31
SRRM3A6NNA2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17■□□□□ 0.31
SRRM3A6NNA2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRRM3A6NNA2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17■□□□□ 0.31
SRRM3A6NNA2 AC005225.4-201ENST00000557330 545 ntBASIC17■□□□□ 0.31
SRRM3A6NNA2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17■□□□□ 0.31
SRRM3A6NNA2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17■□□□□ 0.31
SRRM3A6NNA2 AC005498.2-205ENST00000593218 784 ntBASIC17■□□□□ 0.31
SRRM3A6NNA2 AC011467.2-201ENST00000598425 242 ntBASIC17■□□□□ 0.31
SRRM3A6NNA2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17■□□□□ 0.31
SRRM3A6NNA2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms