Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 U1.21-201ENST00000580816 167 ntBASIC16.66■□□□□ 0.26
CCDC78A2IDD5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC78A2IDD5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 AC025580.3-201ENST00000617932 1424 ntBASIC16.65■□□□□ 0.26
CCDC78A2IDD5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 AC145285.3-201ENST00000564603 959 ntBASIC16.65■□□□□ 0.26
CCDC78A2IDD5 AL031432.2-201ENST00000566714 459 ntBASIC16.65■□□□□ 0.26
CCDC78A2IDD5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 AL928711.1-201ENST00000570165 459 ntBASIC16.65■□□□□ 0.26
CCDC78A2IDD5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 BX640515.1-201ENST00000617215 977 ntBASIC16.65■□□□□ 0.26
CCDC78A2IDD5 AC004877.2-201ENST00000623941 599 ntBASIC16.65■□□□□ 0.26
CCDC78A2IDD5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 AL596087.1-201ENST00000400979 1969 ntBASIC16.65■□□□□ 0.26
CCDC78A2IDD5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCDC78A2IDD5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC78A2IDD5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.64■□□□□ 0.26
CCDC78A2IDD5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.64■□□□□ 0.26
CCDC78A2IDD5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC78A2IDD5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCDC78A2IDD5 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.64■□□□□ 0.25
CCDC78A2IDD5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 AC096734.2-201ENST00000562054 433 ntBASIC16.64■□□□□ 0.25
CCDC78A2IDD5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC78A2IDD5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms