Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 FAM86C2P-203ENST00000528684 1004 ntBASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 AC004835.2-201ENST00000603762 682 ntBASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 AL662844.4-201ENST00000606367 2838 ntBASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 AC092171.3-201ENST00000610122 2651 ntBASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 AL645939.2-201ENST00000427340 991 ntBASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 AC140658.5-201ENST00000438532 169 ntBASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 AC105339.1-204ENST00000636249 355 ntBASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDHGB6Q9Y5F9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGB6Q9Y5F9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms