Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC4.45□□□□□ -1.7
LCE3DQ9BYE3 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 ANKRD19P-201ENST00000338192 862 ntBASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LCE3DQ9BYE3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms