Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
AP1S3Q96PC3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 GPR89P-201ENST00000407924 1495 ntBASIC12.47□□□□□ -0.41
AP1S3Q96PC3 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 AC090114.2-201ENST00000608477 7054 ntBASIC12.47□□□□□ -0.41
AP1S3Q96PC3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 AC103564.2-201ENST00000432853 1299 ntBASIC12.47□□□□□ -0.41
AP1S3Q96PC3 AC007967.3-201ENST00000434308 558 ntBASIC12.47□□□□□ -0.41
AP1S3Q96PC3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
AP1S3Q96PC3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 MIR662-201ENST00000384847 95 ntBASIC12.46□□□□□ -0.41
AP1S3Q96PC3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 AC122714.2-201ENST00000502787 707 ntBASIC12.46□□□□□ -0.41
AP1S3Q96PC3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
AP1S3Q96PC3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
AP1S3Q96PC3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms