Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 PDPK2P-202ENST00000562415 1191 ntBASIC15.37■□□□□ 0.05
NUP43Q8NFH3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 AC068137.2-201ENST00000605408 478 ntBASIC15.37■□□□□ 0.05
NUP43Q8NFH3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 AL078644.1-201ENST00000609881 752 ntBASIC15.37■□□□□ 0.05
NUP43Q8NFH3 FAM197Y3-203ENST00000618346 717 ntBASIC15.37■□□□□ 0.05
NUP43Q8NFH3 AL513190.1-201ENST00000621254 727 ntBASIC15.37■□□□□ 0.05
NUP43Q8NFH3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 U82695.1-201ENST00000635752 1889 ntBASIC15.37■□□□□ 0.05
NUP43Q8NFH3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 AL592424.1-201ENST00000563624 1536 ntBASIC15.37■□□□□ 0.05
NUP43Q8NFH3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NUP43Q8NFH3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 AC092919.2-201ENST00000623631 1645 ntBASIC15.36■□□□□ 0.05
NUP43Q8NFH3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 AC016027.1-202ENST00000607927 1699 ntBASIC15.36■□□□□ 0.05
NUP43Q8NFH3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
NUP43Q8NFH3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.35■□□□□ 0.05
NUP43Q8NFH3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 AL161645.1-201ENST00000622716 1255 ntBASIC15.35■□□□□ 0.05
NUP43Q8NFH3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 AC092865.6-201ENST00000642101 219 ntBASIC15.35■□□□□ 0.05
NUP43Q8NFH3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NUP43Q8NFH3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms