Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 PMS2P2-201ENST00000425039 1128 ntBASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 AC245100.5-201ENST00000452108 331 ntBASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 Z92544.3-201ENST00000624747 417 ntBASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAM1L1Q8N609 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.14■□□□□ 0.18
TRAM1L1Q8N609 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRAM1L1Q8N609 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.14■□□□□ 0.18
TRAM1L1Q8N609 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 MTHFR-217ENST00000641820 1569 ntBASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 AL353705.2-201ENST00000428243 662 ntBASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
TRAM1L1Q8N609 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 AC008677.1-201ENST00000519230 1561 ntBASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 AL645939.2-201ENST00000427340 991 ntBASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 AC067863.1-201ENST00000494933 530 ntBASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 AC003101.2-201ENST00000612557 442 ntBASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 AC007967.4-201ENST00000614700 386 ntBASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAM1L1Q8N609 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms