Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 CRB3P1-201ENST00000449338 276 ntBASIC18.22■□□□□ 0.51
TRIM50Q86XT4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 AC012645.4-201ENST00000610691 1061 ntBASIC18.22■□□□□ 0.51
TRIM50Q86XT4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 AC087499.5-201ENST00000452760 1342 ntBASIC18.22■□□□□ 0.51
TRIM50Q86XT4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM50Q86XT4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 AP005018.1-201ENST00000525475 301 ntBASIC18.21■□□□□ 0.51
TRIM50Q86XT4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 AC009118.2-201ENST00000613275 655 ntBASIC18.21■□□□□ 0.51
TRIM50Q86XT4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 AC022211.2-201ENST00000585075 2527 ntBASIC18.21■□□□□ 0.51
TRIM50Q86XT4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 GGT3P-204ENST00000453783 1664 ntBASIC18.21■□□□□ 0.51
TRIM50Q86XT4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM50Q86XT4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRIM50Q86XT4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 AC092171.3-201ENST00000610122 2651 ntBASIC18.2■□□□□ 0.5
TRIM50Q86XT4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM50Q86XT4 AC005034.1-201ENST00000426657 489 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms