Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.54□□□□□ -0.08
RTTNQ86VV8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.54□□□□□ -0.08
RTTNQ86VV8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.54□□□□□ -0.08
RTTNQ86VV8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.54□□□□□ -0.08
RTTNQ86VV8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.54□□□□□ -0.08
RTTNQ86VV8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 AC087641.1-201ENST00000557561 1021 ntBASIC14.54□□□□□ -0.08
RTTNQ86VV8 MIR4515-201ENST00000584082 81 ntBASIC14.54□□□□□ -0.08
RTTNQ86VV8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.54□□□□□ -0.08
RTTNQ86VV8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.54□□□□□ -0.08
RTTNQ86VV8 AL512652.2-201ENST00000625156 1716 ntBASIC14.54□□□□□ -0.08
RTTNQ86VV8 AC010491.1-201ENST00000563101 2797 ntBASIC14.54□□□□□ -0.08
RTTNQ86VV8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.54□□□□□ -0.08
RTTNQ86VV8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 AC025580.3-201ENST00000617932 1424 ntBASIC14.54□□□□□ -0.08
RTTNQ86VV8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RTTNQ86VV8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RTTNQ86VV8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 AC064836.3-201ENST00000607928 673 ntBASIC14.53□□□□□ -0.08
RTTNQ86VV8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 ADH5P3-201ENST00000433842 1137 ntBASIC14.53□□□□□ -0.08
RTTNQ86VV8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 AC096734.2-201ENST00000562054 433 ntBASIC14.53□□□□□ -0.08
RTTNQ86VV8 AC004449.1-201ENST00000564240 433 ntBASIC14.53□□□□□ -0.08
RTTNQ86VV8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 CYP2A7P1-201ENST00000595391 815 ntBASIC14.53□□□□□ -0.08
RTTNQ86VV8 AL606495.2-201ENST00000605867 535 ntBASIC14.53□□□□□ -0.08
RTTNQ86VV8 Z92544.3-201ENST00000624747 417 ntBASIC14.53□□□□□ -0.08
RTTNQ86VV8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RTTNQ86VV8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.53□□□□□ -0.08
RTTNQ86VV8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RTTNQ86VV8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTTNQ86VV8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
RTTNQ86VV8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.52□□□□□ -0.08
RTTNQ86VV8 ME2P1-201ENST00000426028 1970 ntBASIC14.52□□□□□ -0.08
RTTNQ86VV8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTTNQ86VV8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RTTNQ86VV8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTTNQ86VV8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.52□□□□□ -0.08
RTTNQ86VV8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
RTTNQ86VV8 AC012569.1-201ENST00000591191 1524 ntBASIC14.52□□□□□ -0.08
RTTNQ86VV8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTTNQ86VV8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RTTNQ86VV8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.52□□□□□ -0.08
RTTNQ86VV8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.52□□□□□ -0.08
RTTNQ86VV8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.52□□□□□ -0.08
RTTNQ86VV8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RTTNQ86VV8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.52□□□□□ -0.08
RTTNQ86VV8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.52□□□□□ -0.08
RTTNQ86VV8 AL139011.1-202ENST00000642063 584 ntBASIC14.52□□□□□ -0.08
RTTNQ86VV8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RTTNQ86VV8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms