Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA2Q6UWI4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA2Q6UWI4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SHISA2Q6UWI4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA2Q6UWI4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHISA2Q6UWI4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 AC073439.1-201ENST00000624121 1774 ntBASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 ACTBP11-201ENST00000436287 1126 ntBASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 BANF1P1-201ENST00000553684 263 ntBASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 AL512361.1-201ENST00000554200 418 ntBASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 MIR4259-201ENST00000584466 101 ntBASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 AC060766.1-201ENST00000590824 627 ntBASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 MIR6775-201ENST00000617557 69 ntBASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHISA2Q6UWI4 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 KRT8P44-201ENST00000441609 1350 ntBASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 HCG24-202ENST00000414398 717 ntTSL 3 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 ARL4AP4-201ENST00000434170 518 ntBASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 ELK1P1-201ENST00000485699 580 ntBASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 RRP7BP-205ENST00000566851 833 ntBASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 LINC00304-203ENST00000565008 1864 ntBASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHISA2Q6UWI4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms