Protein–RNA interactions for Protein: P61221

ABCE1, ATP-binding cassette sub-family E member 1, humanhuman

Known RBP Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1P61221 AC004706.3-202ENST00000621574 984 ntBASIC16.19■□□□□ 0.18
ABCE1P61221 AP001350.2-201ENST00000625104 1094 ntBASIC16.19■□□□□ 0.18
ABCE1P61221 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.19■□□□□ 0.18
ABCE1P61221 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCE1P61221 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCE1P61221 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCE1P61221 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCE1P61221 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCE1P61221 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCE1P61221 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCE1P61221 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ABCE1P61221 PPT1-215ENST00000641471 2368 ntBASIC16.19■□□□□ 0.18
ABCE1P61221 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
ABCE1P61221 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
ABCE1P61221 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCE1P61221 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCE1P61221 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCE1P61221 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.18■□□□□ 0.18
ABCE1P61221 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCE1P61221 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCE1P61221 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.18■□□□□ 0.18
ABCE1P61221 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCE1P61221 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCE1P61221 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.18■□□□□ 0.18
ABCE1P61221 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
ABCE1P61221 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.18■□□□□ 0.18
ABCE1P61221 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.18■□□□□ 0.18
ABCE1P61221 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.18■□□□□ 0.18
ABCE1P61221 PGM5P2-202ENST00000637225 1043 ntBASIC16.18■□□□□ 0.18
ABCE1P61221 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
ABCE1P61221 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ABCE1P61221 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCE1P61221 AL592424.1-201ENST00000563624 1536 ntBASIC16.18■□□□□ 0.18
ABCE1P61221 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCE1P61221 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCE1P61221 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCE1P61221 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
ABCE1P61221 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCE1P61221 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ABCE1P61221 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ABCE1P61221 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.17■□□□□ 0.18
ABCE1P61221 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCE1P61221 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 RBM17P3-201ENST00000417687 1192 ntBASIC16.17■□□□□ 0.18
ABCE1P61221 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.17■□□□□ 0.18
ABCE1P61221 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.17■□□□□ 0.18
ABCE1P61221 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCE1P61221 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.17■□□□□ 0.18
ABCE1P61221 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 AC107918.2-201ENST00000530817 355 ntBASIC16.17■□□□□ 0.18
ABCE1P61221 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCE1P61221 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.17■□□□□ 0.18
ABCE1P61221 AC138894.3-201ENST00000603787 634 ntBASIC16.17■□□□□ 0.18
ABCE1P61221 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.17■□□□□ 0.18
ABCE1P61221 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCE1P61221 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ABCE1P61221 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ABCE1P61221 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCE1P61221 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
ABCE1P61221 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.17■□□□□ 0.18
ABCE1P61221 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCE1P61221 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCE1P61221 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.17■□□□□ 0.18
ABCE1P61221 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ABCE1P61221 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCE1P61221 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ABCE1P61221 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ABCE1P61221 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms