Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.98□□□□□ -0.01
CXCR4P61073 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 AL592424.1-201ENST00000563624 1536 ntBASIC14.98□□□□□ -0.01
CXCR4P61073 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.98□□□□□ -0.01
CXCR4P61073 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.98□□□□□ -0.01
CXCR4P61073 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.98□□□□□ -0.01
CXCR4P61073 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 IGHV3-47-201ENST00000425060 335 ntBASIC14.98□□□□□ -0.01
CXCR4P61073 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.98□□□□□ -0.01
CXCR4P61073 LINC00265-3P-201ENST00000447588 903 ntBASIC14.98□□□□□ -0.01
CXCR4P61073 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
CXCR4P61073 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 SIGLEC16-201ENST00000599858 1437 ntBASIC14.98□□□□□ -0.01
CXCR4P61073 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 AC063926.3-201ENST00000624734 5658 ntBASIC14.98□□□□□ -0.01
CXCR4P61073 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.98□□□□□ -0.01
CXCR4P61073 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.98□□□□□ -0.01
CXCR4P61073 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCR4P61073 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCR4P61073 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CXCR4P61073 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.97□□□□□ -0.01
CXCR4P61073 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCR4P61073 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCR4P61073 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CXCR4P61073 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCR4P61073 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CXCR4P61073 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 AP002383.4-201ENST00000442518 975 ntBASIC14.97□□□□□ -0.01
CXCR4P61073 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.97□□□□□ -0.01
CXCR4P61073 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CXCR4P61073 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.97□□□□□ -0.01
CXCR4P61073 AC074051.2-201ENST00000565115 352 ntBASIC14.97□□□□□ -0.01
CXCR4P61073 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.97□□□□□ -0.01
CXCR4P61073 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.97□□□□□ -0.01
CXCR4P61073 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CXCR4P61073 AC116407.4-201ENST00000623319 1061 ntBASIC14.97□□□□□ -0.01
CXCR4P61073 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CXCR4P61073 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCR4P61073 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.97□□□□□ -0.01
CXCR4P61073 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CXCR4P61073 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCR4P61073 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CXCR4P61073 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CXCR4P61073 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
CXCR4P61073 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCR4P61073 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CXCR4P61073 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CXCR4P61073 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.96□□□□□ -0.01
CXCR4P61073 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms