Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HOXA11P31270 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HOXA11P31270 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HOXA11P31270 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.58■□□□□ 0.41
HOXA11P31270 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HOXA11P31270 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HOXA11P31270 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.58■□□□□ 0.4
HOXA11P31270 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.58■□□□□ 0.4
HOXA11P31270 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.58■□□□□ 0.4
HOXA11P31270 AC104794.3-201ENST00000566840 1248 ntBASIC17.58■□□□□ 0.4
HOXA11P31270 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.58■□□□□ 0.4
HOXA11P31270 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
HOXA11P31270 MIR6069-201ENST00000620069 79 ntBASIC17.58■□□□□ 0.4
HOXA11P31270 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.58■□□□□ 0.4
HOXA11P31270 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
HOXA11P31270 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.58■□□□□ 0.4
HOXA11P31270 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXA11P31270 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.58■□□□□ 0.4
HOXA11P31270 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HOXA11P31270 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXA11P31270 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HOXA11P31270 FO393414.2-201ENST00000405153 598 ntBASIC17.57■□□□□ 0.4
HOXA11P31270 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.57■□□□□ 0.4
HOXA11P31270 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.57■□□□□ 0.4
HOXA11P31270 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.57■□□□□ 0.4
HOXA11P31270 SDHAP3-202ENST00000515467 728 ntBASIC17.57■□□□□ 0.4
HOXA11P31270 AC005225.4-201ENST00000557330 545 ntBASIC17.57■□□□□ 0.4
HOXA11P31270 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXA11P31270 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.57■□□□□ 0.4
HOXA11P31270 AC025048.6-201ENST00000634326 1161 ntBASIC17.57■□□□□ 0.4
HOXA11P31270 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXA11P31270 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HOXA11P31270 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXA11P31270 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXA11P31270 NKILA-202ENST00000614771 2598 ntBASIC17.57■□□□□ 0.4
HOXA11P31270 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.57■□□□□ 0.4
HOXA11P31270 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXA11P31270 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.57■□□□□ 0.4
HOXA11P31270 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXA11P31270 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXA11P31270 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
HOXA11P31270 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXA11P31270 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXA11P31270 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HOXA11P31270 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXA11P31270 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXA11P31270 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HOXA11P31270 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 AC245100.5-201ENST00000452108 331 ntBASIC17.56■□□□□ 0.4
HOXA11P31270 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.56■□□□□ 0.4
HOXA11P31270 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXA11P31270 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.56■□□□□ 0.4
HOXA11P31270 API5-211ENST00000534695 560 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXA11P31270 AC012645.4-201ENST00000610691 1061 ntBASIC17.56■□□□□ 0.4
HOXA11P31270 AC004461.2-201ENST00000629517 803 ntBASIC17.56■□□□□ 0.4
HOXA11P31270 AL109936.8-201ENST00000641772 604 ntBASIC17.56■□□□□ 0.4
HOXA11P31270 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HOXA11P31270 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.56■□□□□ 0.4
HOXA11P31270 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXA11P31270 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HOXA11P31270 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXA11P31270 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA11P31270 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXA11P31270 AC007541.1-201ENST00000570282 1469 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms