Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MMP11P24347 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.57■□□□□ 0.08
MMP11P24347 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 AL162727.3-201ENST00000635661 2787 ntBASIC15.57■□□□□ 0.08
MMP11P24347 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP11P24347 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 MIR346-201ENST00000362234 95 ntBASIC15.57■□□□□ 0.08
MMP11P24347 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 SPDYE7P-202ENST00000420373 878 ntBASIC15.57■□□□□ 0.08
MMP11P24347 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP11P24347 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 KRT18P34-201ENST00000488218 1270 ntBASIC15.57■□□□□ 0.08
MMP11P24347 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 SLC25A39P2-201ENST00000537614 270 ntBASIC15.57■□□□□ 0.08
MMP11P24347 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP11P24347 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
MMP11P24347 AP000842.3-202ENST00000569238 1080 ntBASIC15.57■□□□□ 0.08
MMP11P24347 MIR3197-201ENST00000582241 73 ntBASIC15.57■□□□□ 0.08
MMP11P24347 AC013467.2-201ENST00000605472 835 ntBASIC15.57■□□□□ 0.08
MMP11P24347 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
MMP11P24347 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP11P24347 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.57■□□□□ 0.08
MMP11P24347 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.57■□□□□ 0.08
MMP11P24347 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MMP11P24347 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
MMP11P24347 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP11P24347 AL513523.2-202ENST00000427283 2040 ntBASIC15.56■□□□□ 0.08
MMP11P24347 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP11P24347 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP11P24347 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP11P24347 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP11P24347 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP11P24347 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP11P24347 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.56■□□□□ 0.08
MMP11P24347 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP11P24347 AC026150.2-201ENST00000564693 1156 ntBASIC15.56■□□□□ 0.08
MMP11P24347 AC051619.7-201ENST00000568314 623 ntBASIC15.56■□□□□ 0.08
MMP11P24347 AC092364.2-202ENST00000597012 1073 ntBASIC15.56■□□□□ 0.08
MMP11P24347 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.56■□□□□ 0.08
MMP11P24347 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.56■□□□□ 0.08
MMP11P24347 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP11P24347 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP11P24347 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 TUBB3P1-201ENST00000405796 1332 ntBASIC15.56■□□□□ 0.08
MMP11P24347 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.56■□□□□ 0.08
MMP11P24347 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP11P24347 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP11P24347 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
MMP11P24347 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MMP11P24347 ALOX12P2-203ENST00000570921 1945 ntBASIC15.56■□□□□ 0.08
MMP11P24347 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP11P24347 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP11P24347 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
MMP11P24347 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP11P24347 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
MMP11P24347 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MMP11P24347 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms