Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.29□□□□□ -0.44
SMIM17P0DL12 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM17P0DL12 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 AL645728.1-201ENST00000366221 2101 ntBASIC12.29□□□□□ -0.44
SMIM17P0DL12 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.29□□□□□ -0.44
SMIM17P0DL12 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM17P0DL12 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SMIM17P0DL12 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.29□□□□□ -0.44
SMIM17P0DL12 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SMIM17P0DL12 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.29□□□□□ -0.44
SMIM17P0DL12 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.29□□□□□ -0.44
SMIM17P0DL12 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 AL645929.1-201ENST00000420084 975 ntBASIC12.28□□□□□ -0.44
SMIM17P0DL12 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 LINC01238-205ENST00000567549 1107 ntBASIC12.28□□□□□ -0.44
SMIM17P0DL12 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 AC073592.5-201ENST00000624854 528 ntBASIC12.28□□□□□ -0.44
SMIM17P0DL12 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.28□□□□□ -0.44
SMIM17P0DL12 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SMIM17P0DL12 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM17P0DL12 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM17P0DL12 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM17P0DL12 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM17P0DL12 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM17P0DL12 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM17P0DL12 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM17P0DL12 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM17P0DL12 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM17P0DL12 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
SMIM17P0DL12 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM17P0DL12 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM17P0DL12 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM17P0DL12 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM17P0DL12 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM17P0DL12 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms