Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN3O95197 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.31■□□□□ 0.36
RTN3O95197 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN3O95197 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN3O95197 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RTN3O95197 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN3O95197 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RTN3O95197 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN3O95197 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN3O95197 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTN3O95197 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTN3O95197 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.3■□□□□ 0.36
RTN3O95197 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN3O95197 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN3O95197 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 AC023824.1-201ENST00000562945 2975 ntBASIC17.3■□□□□ 0.36
RTN3O95197 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.3■□□□□ 0.36
RTN3O95197 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.3■□□□□ 0.36
RTN3O95197 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN3O95197 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
RTN3O95197 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.3■□□□□ 0.36
RTN3O95197 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.3■□□□□ 0.36
RTN3O95197 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTN3O95197 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN3O95197 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.3■□□□□ 0.36
RTN3O95197 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.3■□□□□ 0.36
RTN3O95197 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN3O95197 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 SPTSSB-204ENST00000617024 1292 ntBASIC17.3■□□□□ 0.36
RTN3O95197 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RTN3O95197 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.3■□□□□ 0.36
RTN3O95197 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.3■□□□□ 0.36
RTN3O95197 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RTN3O95197 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RTN3O95197 GGT4P-201ENST00000623672 1708 ntBASIC17.3■□□□□ 0.36
RTN3O95197 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
RTN3O95197 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN3O95197 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN3O95197 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 TUBB3P1-201ENST00000405796 1332 ntBASIC17.29■□□□□ 0.36
RTN3O95197 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RTN3O95197 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.29■□□□□ 0.36
RTN3O95197 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN3O95197 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RTN3O95197 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.29■□□□□ 0.36
RTN3O95197 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.29■□□□□ 0.36
RTN3O95197 AC098859.1-201ENST00000502915 1238 ntBASIC17.29■□□□□ 0.36
RTN3O95197 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.29■□□□□ 0.36
RTN3O95197 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.29■□□□□ 0.36
RTN3O95197 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN3O95197 AC093512.1-201ENST00000617969 520 ntBASIC17.29■□□□□ 0.36
RTN3O95197 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN3O95197 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.29■□□□□ 0.36
RTN3O95197 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
RTN3O95197 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN3O95197 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RTN3O95197 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.29■□□□□ 0.36
RTN3O95197 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.29■□□□□ 0.36
RTN3O95197 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RTN3O95197 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.29■□□□□ 0.36
RTN3O95197 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RTN3O95197 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.29■□□□□ 0.36
RTN3O95197 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.28■□□□□ 0.36
RTN3O95197 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.28■□□□□ 0.36
RTN3O95197 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.28■□□□□ 0.36
RTN3O95197 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTN3O95197 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.28■□□□□ 0.36
RTN3O95197 AP3S2-216ENST00000617003 1561 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms